Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
TGCT rs9349238 chr6:42663548 G/C 2.89E-8 133 37.95 47.52 20.6 KM Plot
TGCT rs9357400 chr6:42591128 G/A 2.74E-8 133 37.95 50.8 20.6 KM Plot
TGCT rs9358856 chr6:25426768 C/T 2.4E-6 134 49.93 32.37 18.93 KM Plot
TGCT rs9367157 chr6:42591285 G/A 2.74E-8 133 37.95 50.8 20.6 KM Plot
TGCT rs9367160 chr6:42618490 C/T 2.46E-8 134 37.62 51.67 20.6 KM Plot
TGCT rs9367161 chr6:42653359 C/T 4.0E-8 131 37.62 47.52 20.6 KM Plot
TGCT rs9369372 chr6:42575703 T/C 2.74E-8 133 20.6 51.67 37.7 KM Plot
TGCT rs9369373 chr6:42575723 G/T 2.74E-8 133 20.6 51.67 37.7 KM Plot
TGCT rs938044 chr15:48034357 A/G 9.68E-6 134 16.53 41.42 45.1 KM Plot
TGCT rs9381203 chr6:42583625 G/A 3.23E-8 132 37.7 50.8 20.6 KM Plot
TGCT rs9381211 chr6:42670374 G/A 4.33E-6 128 41.97 49.93 23.82 KM Plot
TGCT rs9394910 chr6:42555254 T/C 3.69E-9 131 19.33 51.67 37.95 KM Plot
TGCT rs9394911 chr6:42562996 T/C 5.32E-9 128 19.33 52.38 37.95 KM Plot
TGCT rs9394913 chr6:42632246 G/A 2.46E-8 134 37.62 51.67 20.6 KM Plot
TGCT rs9394917 chr6:42660017 A/G 4.0E-8 131 37.62 47.52 20.6 KM Plot